Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6006462 chr22:44344776 A/C RPL3 chr22:39708887-39716394:- -0.75 -8.98 6.37E-18 Box Plot
THCA rs6006462 chr22:44344776 A/C RPS19BP1 chr22:39925098-39928860:- -0.58 -9.38 2.73E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C RRP7A chr22:42905974-42915808:- -0.57 -6.06 2.77E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C SAPS2 chr22:50781760-50883514:+ -0.91 -10.13 5.54E-22 Box Plot
THCA rs6006462 chr22:44344776 A/C SBF1 chr22:50883429-50913453:- -0.61 -6.83 2.65E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C SCO2 chr22:50961997-50964868:- -0.46 -7.75 5.71E-14 Box Plot
THCA rs6006462 chr22:44344776 A/C SEC14L2 chr22:30792846-30821305:+ -0.67 -7.55 2.29E-13 Box Plot
THCA rs6006462 chr22:44344776 A/C SELO chr22:50639408-50656045:+ -0.67 -10.21 2.73E-22 Box Plot
THCA rs6006462 chr22:44344776 A/C SF3A1 chr22:30727977-30752936:- -0.62 -9 5.24E-18 Box Plot
THCA rs6006462 chr22:44344776 A/C SFI1 chr22:31884674-32014572:+ -0.54 -7.16 2.98E-12 Box Plot
THCA rs6006462 chr22:44344776 A/C SGSM3 chr22:40766595-40806293:+ -0.7 -10.27 1.66E-22 Box Plot
THCA rs6006462 chr22:44344776 A/C SLC25A17 chr22:41165634-41215403:- -0.8 -9.61 4.27E-20 Box Plot
THCA rs6006462 chr22:44344776 A/C SLC2A11 chr22:24198890-24228496:+ -0.77 -7.71 7.58E-14 Box Plot
THCA rs6006462 chr22:44344776 A/C SMARCB1 chr22:24129150-24176703:+ -0.83 -9.36 3.08E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C SMCR7L chr22:39896105-39914136:+ -0.72 -9.63 3.58E-20 Box Plot